Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
flp family type ivb pilin	FCL41_RS06030	Not Available	Negative	1280372 - 1280578	7234.93
flp family type ivb pilin	FCL41_RS06035	Not Available	Negative	1280676 - 1280867	6596.25
response regulator transcription factor	FCL41_RS06040	Not Available	Negative	1281034 - 1281708	23603.3
sensor histidine kinase	FCL41_RS06045	Not Available	Negative	1281720 - 1283351	57233.8
type ii secretion system f family protein	FCL41_RS06050	Not Available	Negative	1283351 - 1284277	33491.1
type ii secretion system f family protein	FCL41_RS06055	Not Available	Negative	1284279 - 1285379	38719.0
cpaf family protein	FCL41_RS06060	Not Available	Negative	1285379 - 1286932	55293.1
cpae family protein	FCL41_RS06065	Not Available	Negative	1286937 - 1288166	43369.2
flp pilus assembly protein cpab	FCL41_RS06070	Not Available	Negative	1288177 - 1288923	26068.1
amp-dependent synthetase/ligase	FCL41_RS06075	Not Available	Negative	1289162 - 1290952	64195.5

Displaying genes 1221 – 1230 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.