Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
translation elongation factor ts	FCL41_RS05630	Not Available	Positive	1195532 - 1196344	28465.0
ump kinase	FCL41_RS05635	Not Available	Positive	1196479 - 1197195	25454.0
ribosome recycling factor	FCL41_RS05640	Not Available	Positive	1197290 - 1197844	20746.6
phosphatidate cytidylyltransferase	FCL41_RS05645	Not Available	Positive	1197862 - 1198737	30648.3
hypothetical protein	FCL41_RS05650	Not Available	Positive	1198817 - 1199188	13685.9
23s rrna (adenine(2503)-c(2))-methyltransferase rlmn	FCL41_RS05655	Not Available	Positive	1199230 - 1200354	40637.8
log family protein	FCL41_RS05660	Not Available	Negative	1200394 - 1201479	39312.4
serine protein kinase rio	FCL41_RS05665	Not Available	Negative	1201527 - 1202390	31968.5
m1 family metallopeptidase	FCL41_RS05670	Not Available	Positive	1202596 - 1204062	54434.6
propionyl-coa synthetase	FCL41_RS05675	Not Available	Positive	1204167 - 1206050	67962.8

Displaying genes 1141 – 1150 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.