Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
signal peptidase i	FCL41_RS05580	Not Available	Positive	1185894 - 1186694	28888.1
ribonuclease hii	FCL41_RS05585	Not Available	Positive	1186699 - 1187460	26102.3
duf2469 domain-containing protein	FCL41_RS05590	Not Available	Positive	1187483 - 1187791	12220.4
alpha/beta hydrolase family esterase	FCL41_RS05595	Not Available	Negative	1187864 - 1189165	45607.4
yran family protein	FCL41_RS05600	Not Available	Positive	1189412 - 1189768	13388.1
yifb family mg chelatase-like aaa atpase	FCL41_RS05605	Not Available	Positive	1189768 - 1191345	56218.9
dna-processing protein dpra	FCL41_RS05610	Not Available	Positive	1191357 - 1192487	39517.4
tyrosine recombinase xerc	FCL41_RS05615	Not Available	Positive	1192632 - 1193531	32594.4
m23 family metallopeptidase	FCL41_RS05620	Not Available	Negative	1193504 - 1194181	23812.8
30s ribosomal protein s2	FCL41_RS05625	Not Available	Positive	1194548 - 1195486	33792.9

Displaying genes 1131 – 1140 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.