Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
abc transporter permease subunit	FCL41_RS05235	Not Available	Negative	1116364 - 1117194	29712.9
abc transporter atp-binding protein	FCL41_RS05240	Not Available	Negative	1117191 - 1118090	31217.8
dsba family oxidoreductase	FCL41_RS05245	Not Available	Positive	1118242 - 1118946	24547.8
heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein	FCL41_RS05250	Not Available	Positive	1119036 - 1120136	38829.0
phosphoglycerate dehydrogenase	FCL41_RS05255	Not Available	Positive	1120300 - 1121886	55282.7
ycze/yyas/yitt family protein	FCL41_RS05260	Not Available	Positive	1121963 - 1122664	24029.2
o-methyltransferase	FCL41_RS05265	Not Available	Negative	1122696 - 1123262	20441.0
hypothetical protein	FCL41_RS17615	Not Available	Positive	1123708 - 1123836	4686.26
3-isopropylmalate dehydrogenase	FCL41_RS05270	Not Available	Positive	1123848 - 1124903	37069.2
branched-chain amino acid aminotransferase	FCL41_RS05275	Not Available	Positive	1124913 - 1125986	39156.4

Displaying genes 1061 – 1070 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.