Nocardioides jishulii strain dk3136

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides jishulii strain dk3136 is characterized by having a single replicon, which is significant for its genomic stability and replication processes. The complete genome of this strain is documented under the accession number NZ_CP040748.1. This bacterium belongs to the genus Nocardioides, which is known for its ecological role in soil environments and its ability to degrade complex organic compounds. The unique traits of Nocardioides jishulii strain dk3136 may provide insights into its metabolic capabilities, particularly in bioremediation and nutrient cycling within its ecosystem. Overall, the presence of a single replicon suggests a streamlined genomic organization, which could be advantageous for the strain's adaptation to its ecological niche. Understanding these attributes may enhance our knowledge of microbial diversity and functionality in soil ecosystems.

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Propionibacteriales
Family	Nocardioidaceae
Genus	Nocardioides
Species	Nocardioides jishulii
Strain	strain dk3136

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	Not Available
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Nocardioides jishulii strain dk3136 chromosome, complete genome.

NZ_CP040748.1

Gene Summary

Adenine Count

526339 bp

Thymine Count

521253 bp

Guanine Count

1240260 bp

Cytosine Count

1248290 bp

Genome Length

3536142 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
glutamate 5-kinase	FCL41_RS04900	Not Available	Positive	1029829 - 1030980	39111.6
cysteine desulfurase family protein	FCL41_RS04905	Not Available	Positive	1031017 - 1032210	41464.6
trna 2-thiouridine(34) synthase mnma	FCL41_RS04910	Not Available	Positive	1032221 - 1033330	39548.4
methionine synthase	FCL41_RS04915	Not Available	Positive	1033327 - 1034415	37639.8
ntp transferase domain-containing protein	FCL41_RS17375	Not Available	Positive	1034575 - 1034733	5502.44
hepn domain-containing protein	FCL41_RS04920	Not Available	Negative	1034766 - 1036064	47727.6
protein kinase family protein	FCL41_RS04925	Not Available	Negative	1036083 - 1037207	42972.9
hypothetical protein	FCL41_RS16960	Not Available	Negative	1037637 - 1037897	9039.33
hypothetical protein	FCL41_RS17380	Not Available	Negative	1038061 - 1038348	9758.34
yaeq family protein	FCL41_RS04935	Not Available	Positive	1038536 - 1039075	19678.2

Displaying genes 991 – 1000 of 3412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.