Aggregatimonas sangjinii strain F202Z8

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aggregatimonas

Description

Aggregatimonas sangjinii strain F202Z8 is characterized by its single replicon, which is reflected in its genomic structure. The strain is identified with the accession number NZ_CP040710.1, indicating its presence in genomic databases for further studies and characterization. This strain belongs to the genus Aggregatimonas, which is known for its role in various ecological niches, particularly in anaerobic environments. The limited information available suggests that strains within this genus may be involved in important biogeochemical processes, such as the degradation of organic materials, which can have implications in carbon cycling and nutrient availability in their respective ecosystems. Understanding the genomic characteristics, such as the presence of a single replicon, may provide insights into the metabolic capabilities and ecological roles of Aggregatimonas sangjinii strain F202Z8. The strain's genomic data could be essential for deciphering its interactions with other microbial communities and its contributions to environmental processes. Further research is necessary to elucidate the specific functions and ecological significance of this strain in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAggregatimonas
SpeciesAggregatimonas sangjinii
Strainstrain F202Z8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatimonas sangjinii strain F202Z8 chromosome, complete

Gene Summary

Adenine Count

1342269 bp

Thymine Count

1338125 bp

Guanine Count

1019598 bp

Cytosine Count

1023622 bp

Genome Length

4723614 bp

Protein-coding Genes

3921 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal phosphate-dependent decarboxylase family proteinFGM00_RS03900Not AvailableNegative930921 - 93242354943.5
duf6597 domain-containing transcriptional factorFGM00_RS03905Not AvailableNegative932395 - 93315028471.7
plp-dependent aminotransferase family proteinFGM00_RS03910Not AvailablePositive933254 - 93469653755.5
putative signal transducing proteinFGM00_RS03915Not AvailableNegative934815 - 9350337635.04
gntp family permeaseFGM00_RS03920Not AvailableNegative935312 - 93662846526.2
30s ribosomal protein s12 methylthiotransferase rimoFGM00_RS03925Not AvailableNegative936690 - 93799149350.1
pyridoxamine 5'-phosphate oxidase family proteinFGM00_RS03930Not AvailableNegative938146 - 93869120775.1
duf4249 family proteinFGM00_RS03935Not AvailableNegative939020 - 93991032500.8
tonb-dependent receptorFGM00_RS03940Not AvailableNegative939914 - 94235292171.3
sdrd b-like domain-containing proteinFGM00_RS03945Not AvailableNegative942827 - 952222325844.0

Displaying genes 791 – 800 of 3971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.