Aggregatimonas sangjinii strain F202Z8

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aggregatimonas

Description

Aggregatimonas sangjinii strain F202Z8 is characterized by its single replicon, which is reflected in its genomic structure. The strain is identified with the accession number NZ_CP040710.1, indicating its presence in genomic databases for further studies and characterization. This strain belongs to the genus Aggregatimonas, which is known for its role in various ecological niches, particularly in anaerobic environments. The limited information available suggests that strains within this genus may be involved in important biogeochemical processes, such as the degradation of organic materials, which can have implications in carbon cycling and nutrient availability in their respective ecosystems. Understanding the genomic characteristics, such as the presence of a single replicon, may provide insights into the metabolic capabilities and ecological roles of Aggregatimonas sangjinii strain F202Z8. The strain's genomic data could be essential for deciphering its interactions with other microbial communities and its contributions to environmental processes. Further research is necessary to elucidate the specific functions and ecological significance of this strain in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAggregatimonas
SpeciesAggregatimonas sangjinii
Strainstrain F202Z8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatimonas sangjinii strain F202Z8 chromosome, complete

Gene Summary

Adenine Count

1342269 bp

Thymine Count

1338125 bp

Guanine Count

1019598 bp

Cytosine Count

1023622 bp

Genome Length

4723614 bp

Protein-coding Genes

3921 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ragb/susd family nutrient uptake outer membrane proteinFGM00_RS00350Not AvailableNegative91201 - 9282059427.5
susc/raga family tonb-linked outer membrane proteinFGM00_RS00355Not AvailableNegative92830 - 95823108125.0
laci family dna-binding transcriptional regulatorFGM00_RS00360Not AvailablePositive96174 - 9720838860.4
beta-phosphoglucomutaseFGM00_RS00365Not AvailablePositive97233 - 9788624272.2
glycoside hydrolase family 65 proteinFGM00_RS00370Not AvailablePositive97961 - 10026488636.4
alpha-amylase family glycosyl hydrolaseFGM00_RS00375Not AvailablePositive100266 - 10212871098.2
glycerophosphodiester phosphodiesteraseFGM00_RS00380Not AvailablePositive102327 - 10301625974.0
nad(p)/fad-dependent oxidoreductaseFGM00_RS00385Not AvailablePositive103017 - 10429747119.9
duf1697 domain-containing proteinFGM00_RS00390Not AvailablePositive104356 - 10489520412.0
diphosphomevalonate/mevalonate 3,5-bisphosphate decarboxylase family proteinFGM00_RS00395Not AvailablePositive105025 - 10611941217.2

Displaying genes 71 – 80 of 3971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.