Aggregatimonas sangjinii strain F202Z8

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aggregatimonas

Description

Aggregatimonas sangjinii strain F202Z8 is characterized by its single replicon, which is reflected in its genomic structure. The strain is identified with the accession number NZ_CP040710.1, indicating its presence in genomic databases for further studies and characterization. This strain belongs to the genus Aggregatimonas, which is known for its role in various ecological niches, particularly in anaerobic environments. The limited information available suggests that strains within this genus may be involved in important biogeochemical processes, such as the degradation of organic materials, which can have implications in carbon cycling and nutrient availability in their respective ecosystems. Understanding the genomic characteristics, such as the presence of a single replicon, may provide insights into the metabolic capabilities and ecological roles of Aggregatimonas sangjinii strain F202Z8. The strain's genomic data could be essential for deciphering its interactions with other microbial communities and its contributions to environmental processes. Further research is necessary to elucidate the specific functions and ecological significance of this strain in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAggregatimonas
SpeciesAggregatimonas sangjinii
Strainstrain F202Z8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatimonas sangjinii strain F202Z8 chromosome, complete

Gene Summary

Adenine Count

1342269 bp

Thymine Count

1338125 bp

Guanine Count

1019598 bp

Cytosine Count

1023622 bp

Genome Length

4723614 bp

Protein-coding Genes

3921 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
serine hydrolase domain-containing proteinFGM00_RS14845Not AvailableNegative3533279 - 353435840384.5
duf6249 domain-containing proteinFGM00_RS14850Not AvailableNegative3534431 - 353477512584.7
rna polymerase sigma factorFGM00_RS14855Not AvailablePositive3534896 - 353550123547.4
hypothetical proteinFGM00_RS14860Not AvailablePositive3535482 - 353589215362.5
efflux rnd transporter permease subunitFGM00_RS14865Not AvailableNegative3535926 - 3539093117348.0
efflux rnd transporter periplasmic adaptor subunitFGM00_RS14870Not AvailableNegative3539108 - 354031644362.1
efflux transporter outer membrane subunitFGM00_RS14875Not AvailableNegative3540334 - 354172852647.6
alginate lyase family proteinFGM00_RS14880Not AvailablePositive3542253 - 354353648495.2
sulfataseFGM00_RS14885Not AvailablePositive3543571 - 354505856484.1
sulfataseFGM00_RS14890Not AvailablePositive3545093 - 354657456322.4

Displaying genes 2991 – 3000 of 3971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.