Aggregatimonas sangjinii strain F202Z8

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Aggregatimonas

Description

Aggregatimonas sangjinii strain F202Z8 is characterized by its single replicon, which is reflected in its genomic structure. The strain is identified with the accession number NZ_CP040710.1, indicating its presence in genomic databases for further studies and characterization. This strain belongs to the genus Aggregatimonas, which is known for its role in various ecological niches, particularly in anaerobic environments. The limited information available suggests that strains within this genus may be involved in important biogeochemical processes, such as the degradation of organic materials, which can have implications in carbon cycling and nutrient availability in their respective ecosystems. Understanding the genomic characteristics, such as the presence of a single replicon, may provide insights into the metabolic capabilities and ecological roles of Aggregatimonas sangjinii strain F202Z8. The strain's genomic data could be essential for deciphering its interactions with other microbial communities and its contributions to environmental processes. Further research is necessary to elucidate the specific functions and ecological significance of this strain in its natural habitat.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusAggregatimonas
SpeciesAggregatimonas sangjinii
Strainstrain F202Z8

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Aggregatimonas sangjinii strain F202Z8 chromosome, complete

Gene Summary

Adenine Count

1342269 bp

Thymine Count

1338125 bp

Guanine Count

1019598 bp

Cytosine Count

1023622 bp

Genome Length

4723614 bp

Protein-coding Genes

3921 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5723 family proteinFGM00_RS13550Not AvailableNegative3228377 - 322980752611.0
hypothetical proteinFGM00_RS13555Not AvailableNegative3229804 - 323036120396.3
yjjg family noncanonical pyrimidine nucleotidaseFGM00_RS13560Not AvailableNegative3230402 - 323109126540.6
polysaccharide deacetylase family proteinFGM00_RS13565Not AvailableNegative3231084 - 323237951067.8
radc family proteinFGM00_RS13570Not AvailableNegative3232436 - 323313425667.1
duf1569 domain-containing proteinFGM00_RS13575Not AvailablePositive3233200 - 323364017370.9
fmn-binding negative transcriptional regulatorFGM00_RS13580Not AvailablePositive3233855 - 323450524926.7
hypothetical proteinFGM00_RS13585Not AvailableNegative3234475 - 32347028870.66
udp-n-acetylmuramate--l-alanine ligaseFGM00_RS13590Not AvailableNegative3234771 - 323612950649.9
gliding motility-associated c-terminal domain-containing proteinFGM00_RS13595Not AvailablePositive3236396 - 3239275103280.0

Displaying genes 2731 – 2740 of 3971 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.