Lysobacter enzymogenes strain YC36

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Lysobacter

Description

Lysobacter enzymogenes strain YC36 is a Gram-negative, rod-shaped bacterium primarily found in soil habitats. Its single replicon structure suggests a streamlined genomic organization, which can be advantageous for adaptability in diverse environments. The strain is cataloged under the accession number NZ_CP040656.1, indicating its genetic sequence is available for further study and analysis. One notable aspect of Lysobacter enzymogenes, including the YC36 strain, is its potential role in soil ecosystems. Members of the Lysobacter genus are known for their ability to degrade complex organic materials and contribute to nutrient cycling. This capacity can enhance soil health and fertility, making Lysobacter enzymogenes an important microbial player in agricultural contexts. Additionally, the ecological significance of L. enzymogenes extends to its interactions with other soil microorganisms and plants, potentially influencing plant growth and disease resistance. Understanding the traits of strains like YC36 can provide insights into their functional roles in soil ecology, emphasizing the importance of studying microbial diversity and its implications for environmental sustainability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusLysobacter
SpeciesLysobacter enzymogenes
Strainstrain YC36

Profile

Physiology
Gram staining propertiesGram-negative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Lysobacter enzymogenes strain YC36
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lysobacter enzymogenes strain YC36 chromosome, complete genome.

Gene Summary

Adenine Count

921289 bp

Thymine Count

924395 bp

Guanine Count

2144269 bp

Cytosine Count

2141564 bp

Genome Length

6131517 bp

Protein-coding Genes

5246 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv secretion system protein virb3FE772_RS14065Not AvailableNegative3380398 - 338070612154.5
trbc/virb2 family proteinFE772_RS14070Not AvailableNegative3380699 - 338106712920.0
lytic transglycosylase domain-containing proteinFE772_RS14075Not AvailableNegative3381249 - 338202827192.3
p-type dna transfer atpase virb11FE772_RS14080Not AvailableNegative3382185 - 338322538474.8
trbi/virb10 family proteinFE772_RS14085Not AvailableNegative3383262 - 338447943011.8
trbg/virb9 family p-type conjugative transfer proteinFE772_RS14090Not AvailableNegative3384488 - 338525529058.6
virb8 family proteinFE772_RS14095Not AvailableNegative3385239 - 338627938415.1
hypothetical proteinFE772_RS14100Not AvailableNegative3386358 - 338679815843.6
pyridoxal phosphate-dependent aminotransferaseFE772_RS14105Not AvailableNegative3387157 - 338830542213.3
duf3293 domain-containing proteinFE772_RS14110Not AvailablePositive3388530 - 338900317056.8

Displaying genes 2881 – 2890 of 5315 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.