Natrinema pallidum strain BOL6-1

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema pallidum strain BOL6-1 is characterized by possessing two replicons, which is a notable trait among archaeal species. This strain is cataloged under two accessions: NZ_CP040638.1 and NZ_CP040639.1. The presence of dual replicons may suggest a potential for increased genetic diversity and adaptability, which is often advantageous in extreme environments where halophilic archaea, such as Natrinema pallidum, are typically found. The ecological niche of Natrinema pallidum generally includes hypersaline conditions, where its physiological traits enable survival and growth. Understanding the genomic structure of Natrinema pallidum strain BOL6-1 through its replicons may provide insights into its metabolic pathways and evolutionary strategies. The study of such strains can enhance our knowledge of microbial life in extreme conditions, which can have implications for biotechnology applications, including bioremediation and the development of novel enzymes. Thus, the genomic characteristics of Natrinema pallidum strain BOL6-1, particularly its dual replicons, may be significant in exploring the adaptability and ecological roles of halophilic microorganisms.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema pallidum
Strainstrain BOL6-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema pallidum strain BOL6-1 plasmid pNPA200, complete

Gene Summary

Adenine Count

40108 bp

Thymine Count

40018 bp

Guanine Count

61262 bp

Cytosine Count

61813 bp

Genome Length

203201 bp

Protein-coding Genes

186 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4350 domain-containing proteinFGF80_RS17650Not AvailableNegative49362 - 5048640463.3
hypothetical proteinFGF80_RS17655Not AvailableNegative50545 - 5082310611.6
metal-dependent hydrolaseFGF80_RS17660Not AvailablePositive50994 - 5156321253.8
hypothetical proteinFGF80_RS19365Not AvailablePositive51942 - 5310239983.4
pgf-pre-pgf domain-containing proteinFGF80_RS17670Not AvailablePositive53220 - 5533774176.7
abc transporter atp-binding proteinFGF80_RS17675Not AvailablePositive55457 - 5623628154.4
abc transporter permeaseFGF80_RS17680Not AvailablePositive56223 - 5743743135.9
abc transporter permeaseFGF80_RS17685Not AvailablePositive57437 - 5868143617.2
sulfite exporter taue/safe family proteinFGF80_RS17690Not AvailableNegative58923 - 5972328214.2
heavy metal translocating p-type atpaseFGF80_RS17695Not AvailableNegative59909 - 6234186386.8

Displaying genes 41 – 50 of 298 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.