Natrinema versiforme strain BOL5-4

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Natrialbaceae

Genus

Natrinema

Description

Natrinema versiforme strain BOL5-4 is a halophilic archaeon notable for its adaptation to extreme environments, specifically inhabiting rock surfaces. This strain is characterized by the presence of two replicons, which can play a critical role in its genetic stability and adaptability in high-salinity conditions. The strain is cataloged under two accession numbers, NZ_CP040331.1 and NZ_CP040332.1, reflecting its genetic sequencing data in public databases. This genetic information can provide insights into the organism's metabolic pathways and potential applications in biotechnology, such as bioremediation or industrial processes that require high salt concentrations. The ecological significance of Natrinema versiforme strain BOL5-4 lies in its ability to thrive in environments that are inhospitable to many other forms of life. Its presence on rock surfaces indicates a niche adaptation that could influence the microbial community structure in saline habitats. As a halophile, it may play a role in biogeochemical cycles, including those involving carbon and nitrogen, in its environment. Understanding the characteristics and ecological roles of strains like BOL5-4 enhances our knowledge of microbial diversity and adaptation mechanisms in extreme habitats.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyNatrialbaceae
GenusNatrinema
SpeciesNatrinema versiforme
Strainstrain BOL5-4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrock surfaces
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Natrinema versiforme strain BOL5-4 plasmid pNVE414, complete

Gene Summary

Adenine Count

81875 bp

Thymine Count

83779 bp

Guanine Count

123058 bp

Cytosine Count

125153 bp

Genome Length

413865 bp

Protein-coding Genes

365 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nickel abc transporter permeaseFEJ81_RS21180Not AvailablePositive32356 - 3330633700.4
nickel transporter permeaseFEJ81_RS21185Not AvailablePositive33381 - 3421128939.8
abc transporter atp-binding proteinFEJ81_RS21190Not AvailablePositive34214 - 3628373285.3
abc transporter substrate-binding proteinFEJ81_RS21195Not AvailablePositive36297 - 3781455462.3
universal stress proteinFEJ81_RS24465Not AvailablePositive37907 - 381528806.31
pirin family proteinFEJ81_RS21205Not AvailableNegative39308 - 4006327413.2
superoxide dismutaseFEJ81_RS21210Not AvailablePositive40266 - 4086822533.2
winged helix-turn-helix domain-containing proteinFEJ81_RS21215Not AvailableNegative41060 - 4201635064.7
tetr/acrr family transcriptional regulatorFEJ81_RS21220Not AvailablePositive42163 - 4279224232.1
aldehyde dehydrogenase family proteinFEJ81_RS21225Not AvailablePositive42930 - 4442052540.7

Displaying genes 31 – 40 of 851 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.