Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain A1_181 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain A1_181 plasmid p_unnamed2, complete
Gene Summary
Adenine Count
25514 bp
Thymine Count
25282 bp
Guanine Count
23206 bp
Cytosine Count
23580 bp
Genome Length
97582 bp
Protein-coding Genes
5 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic diguanylate phosphodiesterase | FDP43_RS13335 | Not Available | Negative | 2731698 - 2733221 | 56758.0 |
| protein ymgc | FDP43_RS13340 | Not Available | Negative | 2733553 - 2733801 | 9664.68 |
| biofilm/acid-resistance regulator arir | FDP43_RS13345 | Not Available | Negative | 2733914 - 2734180 | 9694.59 |
| two-component-system connector protein ymga | FDP43_RS13350 | Not Available | Negative | 2734209 - 2734481 | 10345.5 |
| regulatory protein ycgz | FDP43_RS13355 | Not Available | Negative | 2734524 - 2734760 | 8694.37 |
| blue light-responsive regulator bluf | FDP43_RS13360 | Not Available | Positive | 2735074 - 2736285 | 45297.6 |
| dna-binding transcriptional repressor blur | FDP43_RS13365 | Not Available | Positive | 2736490 - 2737221 | 28266.2 |
| duf1398 domain-containing protein | FDP43_RS13370 | Not Available | Positive | 2737442 - 2737846 | 15770.0 |
| hypothetical protein | FDP43_RS13375 | Not Available | Positive | 2737899 - 2738009 | 4216.47 |
| protein ymgk | FDP43_RS26030 | Not Available | Positive | 2738245 - 2738289 | 1589.03 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





