Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain A1_181 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain A1_181 plasmid p_unnamed2, complete
Gene Summary
Adenine Count
25514 bp
Thymine Count
25282 bp
Guanine Count
23206 bp
Cytosine Count
23580 bp
Genome Length
97582 bp
Protein-coding Genes
5 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii | FDP43_RS12735 | Not Available | Positive | 2616363 - 2616953 | 21837.3 |
| aconitate hydratase acna | FDP43_RS12740 | Not Available | Negative | 2617017 - 2619692 | 97708.8 |
| small membrane protein ymic | FDP43_RS12745 | Not Available | Negative | 2619856 - 2619951 | 3822.77 |
| protein ycix | FDP43_RS12750 | Not Available | Negative | 2620065 - 2620232 | 6338.19 |
| ymia family putative membrane protein | FDP43_RS12755 | Not Available | Negative | 2620235 - 2620375 | 5337.71 |
| hth-type transcriptional regulator cysb | FDP43_RS12760 | Not Available | Negative | 2620694 - 2621668 | 36152.5 |
| type i dna topoisomerase | FDP43_RS12765 | Not Available | Negative | 2621878 - 2624475 | 97387.1 |
| ycin family protein | FDP43_RS12770 | Not Available | Positive | 2624855 - 2625106 | 9386.17 |
| protease sohb | FDP43_RS12775 | Not Available | Negative | 2625142 - 2626191 | 39368.7 |
| ycik family oxidoreductase | FDP43_RS12780 | Not Available | Positive | 2626411 - 2627169 | 27947.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





