Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain A1_181 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain A1_181 plasmid p_unnamed2, complete
Gene Summary
Adenine Count
25514 bp
Thymine Count
25282 bp
Guanine Count
23206 bp
Cytosine Count
23580 bp
Genome Length
97582 bp
Protein-coding Genes
5 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic di-gmp phosphodiesterase | FDP43_RS12690 | Not Available | Positive | 2608783 - 2610768 | 74656.2 |
| protein ymid | FDP43_RS26315 | Not Available | Negative | 2610750 - 2610878 | 4937.05 |
| protein yciz | FDP43_RS12695 | Not Available | Positive | 2610915 - 2611088 | 6441.71 |
| dna-binding transcriptional regulator ycit | FDP43_RS12700 | Not Available | Positive | 2611178 - 2611927 | 27590.2 |
| osmotically-inducible lipoprotein osmb | FDP43_RS12705 | Not Available | Positive | 2612196 - 2612414 | 6948.51 |
| stress response translation initiation inhibitor ycih | FDP43_RS12710 | Not Available | Negative | 2612540 - 2612866 | 11396.9 |
| orotidine-5'-phosphate decarboxylase | FDP43_RS12715 | Not Available | Negative | 2612866 - 2613603 | 26367.8 |
| lipopolysaccharide assembly protein lapb | FDP43_RS12720 | Not Available | Negative | 2613796 - 2614965 | 44533.6 |
| lipopolysaccharide assembly protein lapa | FDP43_RS12725 | Not Available | Negative | 2614972 - 2615280 | 11352.1 |
| phosphatidylglycerophosphatase b | FDP43_RS12730 | Not Available | Negative | 2615429 - 2616193 | 29022.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





