Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain A1_181 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain A1_181 plasmid p_unnamed2, complete
Gene Summary
Adenine Count
25514 bp
Thymine Count
25282 bp
Guanine Count
23206 bp
Cytosine Count
23580 bp
Genome Length
97582 bp
Protein-coding Genes
5 genes
Non-Coding Genes
109 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein operon transcriptional activator | FDP43_RS12590 | Not Available | Positive | 2587726 - 2588703 | 36970.6 |
| 4-aminobutyrate transaminase | FDP43_RS12595 | Not Available | Negative | 2588834 - 2590099 | 44745.6 |
| gamma-glutamylputrescine oxidase | FDP43_RS12600 | Not Available | Negative | 2590137 - 2591417 | 47165.3 |
| aldehyde dehydrogenase puuc | FDP43_RS12605 | Not Available | Negative | 2591419 - 2592906 | 53376.5 |
| hth-type transcriptional regulator puur | FDP43_RS12610 | Not Available | Negative | 2593056 - 2593613 | 20092.8 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | FDP43_RS12615 | Not Available | Negative | 2593640 - 2594404 | 28014.7 |
| glutamate-putrescine ligase | FDP43_RS12620 | Not Available | Positive | 2594616 - 2596034 | 53180.2 |
| protein ymje | FDP43_RS12625 | Not Available | Positive | 2596183 - 2596347 | 5971.24 |
| putrescine/proton symporter puup | FDP43_RS12630 | Not Available | Positive | 2596337 - 2597722 | 50869.9 |
| ymja family protein | FDP43_RS12635 | Not Available | Positive | 2597856 - 2598101 | 9321.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





