Pseudoduganella umbonata strain DSMZ 26121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella umbonata strain DSMZ 26121 is characterized by its single replicon, which is a notable trait among various bacterial species. The strain is cataloged under the accession number NZ_CP040017.1, allowing for easy reference and retrieval of genomic information relevant to its classification and study. As a member of the Pseudoduganella genus, this strain contributes to the understanding of microbial diversity and the ecological roles these bacteria may play in their respective environments. While specific ecological interactions and functional traits of Pseudoduganella umbonata strain DSMZ 26121 are not detailed here, the presence of a single replicon suggests a streamlined genomic architecture, which may be associated with particular metabolic efficiencies or adaptation strategies in its habitat. Overall, the characterization of Pseudoduganella umbonata strain DSMZ 26121 highlights the significance of genomic studies in microbiology, offering insights into the evolutionary adaptations and ecological niches that bacteria can occupy. Further investigation into its biological properties and interactions within microbial communities could enhance our understanding of its role in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella umbonata
Strainstrain DSMZ 26121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella umbonata strain DSMZ 26121 chromosome, complete

Gene Summary

Adenine Count

1289596 bp

Thymine Count

1285817 bp

Guanine Count

2426943 bp

Cytosine Count

2423809 bp

Genome Length

7426165 bp

Protein-coding Genes

6168 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna dihydrouridine synthase dusbFCL38_RS25020Not AvailablePositive5953985 - 595500137610.0
helix-turn-helix domain-containing proteinFCL38_RS25025Not AvailablePositive5955044 - 59552778839.68
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseFCL38_RS25030Not AvailablePositive5955369 - 595696757048.4
crossover junction endodeoxyribonuclease ruvcFCL38_RS25035Not AvailablePositive5957085 - 595761518217.4
holliday junction branch migration protein ruvaFCL38_RS25040Not AvailablePositive5957651 - 595823220395.2
holliday junction branch migration dna helicase ruvbFCL38_RS25045Not AvailablePositive5958248 - 595929738351.2
yaii/yqxd family proteinFCL38_RS25050Not AvailablePositive5959311 - 595976316450.7
glutaminyl-peptide cyclotransferaseFCL38_RS25055Not AvailablePositive5959804 - 596057428257.7
duf2147 domain-containing proteinFCL38_RS25060Not AvailableNegative5960995 - 596145316300.7
valine--trna ligaseFCL38_RS25065Not AvailableNegative5961553 - 5964366104402.0

Displaying genes 5051 – 5060 of 6301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.