Pseudoduganella umbonata strain DSMZ 26121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella umbonata strain DSMZ 26121 is characterized by its single replicon, which is a notable trait among various bacterial species. The strain is cataloged under the accession number NZ_CP040017.1, allowing for easy reference and retrieval of genomic information relevant to its classification and study. As a member of the Pseudoduganella genus, this strain contributes to the understanding of microbial diversity and the ecological roles these bacteria may play in their respective environments. While specific ecological interactions and functional traits of Pseudoduganella umbonata strain DSMZ 26121 are not detailed here, the presence of a single replicon suggests a streamlined genomic architecture, which may be associated with particular metabolic efficiencies or adaptation strategies in its habitat. Overall, the characterization of Pseudoduganella umbonata strain DSMZ 26121 highlights the significance of genomic studies in microbiology, offering insights into the evolutionary adaptations and ecological niches that bacteria can occupy. Further investigation into its biological properties and interactions within microbial communities could enhance our understanding of its role in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella umbonata
Strainstrain DSMZ 26121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella umbonata strain DSMZ 26121 chromosome, complete

Gene Summary

Adenine Count

1289596 bp

Thymine Count

1285817 bp

Guanine Count

2426943 bp

Cytosine Count

2423809 bp

Genome Length

7426165 bp

Protein-coding Genes

6168 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron-sulfur cluster insertion protein erpaFCL38_RS24970Not AvailablePositive5943831 - 594419312927.1
duf2061 domain-containing proteinFCL38_RS24975Not AvailableNegative5944328 - 594474114803.3
duf4287 domain-containing proteinFCL38_RS24980Not AvailablePositive5944982 - 59451917648.12
anhydro-n-acetylmuramic acid kinaseFCL38_RS24985Not AvailableNegative5945195 - 594629238413.9
m23 family metallopeptidaseFCL38_RS24990Not AvailableNegative5946468 - 594785350154.7
tyrosine--trna ligaseFCL38_RS24995Not AvailablePositive5948177 - 594933742595.5
d-aminoacyl-trna deacylaseFCL38_RS25000Not AvailablePositive5949334 - 594978315669.9
ybhb/ybcl family raf kinase inhibitor-like proteinFCL38_RS25005Not AvailablePositive5949807 - 595044523148.1
histidine phosphatase family proteinFCL38_RS25010Not AvailablePositive5950442 - 595108323897.3
tim-barrel domain-containing proteinFCL38_RS25015Not AvailableNegative5951326 - 595371087580.7

Displaying genes 5041 – 5050 of 6301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.