Pseudoduganella umbonata strain DSMZ 26121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella umbonata strain DSMZ 26121 is characterized by its single replicon, which is a notable trait among various bacterial species. The strain is cataloged under the accession number NZ_CP040017.1, allowing for easy reference and retrieval of genomic information relevant to its classification and study. As a member of the Pseudoduganella genus, this strain contributes to the understanding of microbial diversity and the ecological roles these bacteria may play in their respective environments. While specific ecological interactions and functional traits of Pseudoduganella umbonata strain DSMZ 26121 are not detailed here, the presence of a single replicon suggests a streamlined genomic architecture, which may be associated with particular metabolic efficiencies or adaptation strategies in its habitat. Overall, the characterization of Pseudoduganella umbonata strain DSMZ 26121 highlights the significance of genomic studies in microbiology, offering insights into the evolutionary adaptations and ecological niches that bacteria can occupy. Further investigation into its biological properties and interactions within microbial communities could enhance our understanding of its role in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella umbonata
Strainstrain DSMZ 26121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella umbonata strain DSMZ 26121 chromosome, complete

Gene Summary

Adenine Count

1289596 bp

Thymine Count

1285817 bp

Guanine Count

2426943 bp

Cytosine Count

2423809 bp

Genome Length

7426165 bp

Protein-coding Genes

6168 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 2 tim barrel-domain containing proteinFCL38_RS02205Not AvailablePositive535379 - 538507115276.0
glycosyl hydrolase family 95 catalytic domain-containing proteinFCL38_RS02210Not AvailableNegative538526 - 54101589418.7
tonb-dependent receptor domain-containing proteinFCL38_RS02215Not AvailablePositive541346 - 544282105872.0
glycoside hydrolase family 28 proteinFCL38_RS02220Not AvailablePositive544384 - 54620765193.5
pectate lyaseFCL38_RS02225Not AvailablePositive546231 - 54755647188.0
type i methionyl aminopeptidaseFCL38_RS02230Not AvailablePositive547902 - 54869028383.0
hypothetical proteinFCL38_RS02235Not AvailableNegative548755 - 55090579171.6
nuclear transport factor 2 family proteinFCL38_RS02240Not AvailablePositive551034 - 55147416247.5
gfa family proteinFCL38_RS02245Not AvailablePositive551484 - 55184912983.3
duf3297 family proteinFCL38_RS02250Not AvailableNegative551928 - 5521769477.27

Displaying genes 471 – 480 of 6301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.