Pseudoduganella umbonata strain DSMZ 26121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella umbonata strain DSMZ 26121 is characterized by its single replicon, which is a notable trait among various bacterial species. The strain is cataloged under the accession number NZ_CP040017.1, allowing for easy reference and retrieval of genomic information relevant to its classification and study. As a member of the Pseudoduganella genus, this strain contributes to the understanding of microbial diversity and the ecological roles these bacteria may play in their respective environments. While specific ecological interactions and functional traits of Pseudoduganella umbonata strain DSMZ 26121 are not detailed here, the presence of a single replicon suggests a streamlined genomic architecture, which may be associated with particular metabolic efficiencies or adaptation strategies in its habitat. Overall, the characterization of Pseudoduganella umbonata strain DSMZ 26121 highlights the significance of genomic studies in microbiology, offering insights into the evolutionary adaptations and ecological niches that bacteria can occupy. Further investigation into its biological properties and interactions within microbial communities could enhance our understanding of its role in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella umbonata
Strainstrain DSMZ 26121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella umbonata strain DSMZ 26121 chromosome, complete

Gene Summary

Adenine Count

1289596 bp

Thymine Count

1285817 bp

Guanine Count

2426943 bp

Cytosine Count

2423809 bp

Genome Length

7426165 bp

Protein-coding Genes

6168 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam family heme chaperone hemwFCL38_RS13930Not AvailableNegative3378341 - 337959446201.1
rdgb/ham1 family non-canonical purine ntp pyrophosphataseFCL38_RS13935Not AvailableNegative3379591 - 338017520985.7
ribonuclease phFCL38_RS13940Not AvailableNegative3380278 - 338101226312.6
pp2c family protein-serine/threonine phosphataseFCL38_RS13945Not AvailableNegative3381043 - 338197233239.5
serine/threonine-protein kinaseFCL38_RS13950Not AvailableNegative3381979 - 338298036319.1
yicc/yloc family endoribonucleaseFCL38_RS13955Not AvailablePositive3383080 - 338397032373.3
guanylate kinaseFCL38_RS13960Not AvailablePositive3384061 - 338470223539.9
dna-directed rna polymerase subunit omegaFCL38_RS13965Not AvailablePositive3384879 - 33850827487.4
rela/spot family proteinFCL38_RS13970Not AvailablePositive3385145 - 338742484458.9
transposaseFCL38_RS13975Not AvailableNegative3387518 - 338815624763.8

Displaying genes 2821 – 2830 of 6301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.