Pseudoduganella umbonata strain DSMZ 26121

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Pseudoduganella

Description

Pseudoduganella umbonata strain DSMZ 26121 is characterized by its single replicon, which is a notable trait among various bacterial species. The strain is cataloged under the accession number NZ_CP040017.1, allowing for easy reference and retrieval of genomic information relevant to its classification and study. As a member of the Pseudoduganella genus, this strain contributes to the understanding of microbial diversity and the ecological roles these bacteria may play in their respective environments. While specific ecological interactions and functional traits of Pseudoduganella umbonata strain DSMZ 26121 are not detailed here, the presence of a single replicon suggests a streamlined genomic architecture, which may be associated with particular metabolic efficiencies or adaptation strategies in its habitat. Overall, the characterization of Pseudoduganella umbonata strain DSMZ 26121 highlights the significance of genomic studies in microbiology, offering insights into the evolutionary adaptations and ecological niches that bacteria can occupy. Further investigation into its biological properties and interactions within microbial communities could enhance our understanding of its role in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusPseudoduganella
SpeciesPseudoduganella umbonata
Strainstrain DSMZ 26121

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoduganella umbonata strain DSMZ 26121 chromosome, complete

Gene Summary

Adenine Count

1289596 bp

Thymine Count

1285817 bp

Guanine Count

2426943 bp

Cytosine Count

2423809 bp

Genome Length

7426165 bp

Protein-coding Genes

6168 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide biosynthesis proteinFCL38_RS06305Not AvailableNegative1527416 - 152887052043.7
glycosyltransferaseFCL38_RS06310Not AvailableNegative1528854 - 153093877153.7
putative o-glycosylation ligase, exosortase a system-associatedFCL38_RS06315Not AvailablePositive1530922 - 153236753082.8
hypothetical proteinFCL38_RS06320Not AvailablePositive1532372 - 153309427730.2
tetratricopeptide repeat proteinFCL38_RS06325Not AvailablePositive1533073 - 153369023088.7
pep-cterm-box response regulator transcription factorFCL38_RS06330Not AvailableNegative1533872 - 153521849314.1
xrta/pep-cterm system histidine kinase prskFCL38_RS06335Not AvailableNegative1535251 - 153732075045.0
tigr03013 family xrta/pep-cterm system glycosyltransferaseFCL38_RS06340Not AvailableNegative1537320 - 153869950520.9
l-aspartate oxidaseFCL38_RS06345Not AvailablePositive1538881 - 154049459147.6
gnat family n-acetyltransferaseFCL38_RS06350Not AvailablePositive1540491 - 154102719449.6

Displaying genes 1281 – 1290 of 6301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.