Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain CFBP6623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629263 bp
Thymine Count
618226 bp
Guanine Count
893014 bp
Cytosine Count
913143 bp
Genome Length
3053646 bp
Protein-coding Genes
2790 genes
Non-Coding Genes
182 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CFBP6623_RS03345 | Not Available | Negative | 661572 - 662771 | 41314.1 |
| Gene transfer aget (gta) orfg9-like phage major tail protein | CFBP6623_RS03350 | Not Available | Positive | 662866 - 663273 | 14160.9 |
| gene transfer agent family protein | CFBP6623_RS03355 | Not Available | Positive | 663273 - 663629 | 12412.8 |
| rcc01693 family protein | CFBP6623_RS27060 | Not Available | Positive | 663682 - 663840 | 5952.29 |
| duf2442 domain-containing protein | CFBP6623_RS03365 | Not Available | Negative | 663846 - 664250 | 14607.4 |
| duf4160 domain-containing protein | CFBP6623_RS03370 | Not Available | Negative | 664243 - 664470 | 8739.57 |
| Putative tail tape measure protein | CFBP6623_RS03375 | Not Available | Positive | 664583 - 665164 | 18960.8 |
| Tail protein | CFBP6623_RS03380 | Not Available | Positive | 665209 - 665847 | 22941.4 |
| Minor tail protein | CFBP6623_RS03385 | Not Available | Positive | 665844 - 666728 | 30997.2 |
| Phage cell wall peptidase | CFBP6623_RS03390 | Not Available | Positive | 666725 - 667159 | 15825.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


