Agrobacterium tumefaciens strain CFBP6623

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain CFBP6623 is a Gram-negative, rod-shaped bacterium that displays optimal growth at 25.0°C and thrives in aerobic conditions. This strain is part of a widely studied species known for its role in plant-microbe interactions, particularly in the context of genetic transfer to host plants, which is facilitated by its unique capacity to transfer DNA via a plasmid. The versatility of A. tumefaciens CFBP6623 allows it to inhabit multiple environments, suggesting its adaptability and potential ubiquity in various ecological niches. This adaptability may play a role in its interactions with a diverse range of plant hosts, as well as its ability to survive in different soil and water conditions. In summary, the combination of its Gram-negative classification, rod shape, optimal growth temperature, and aerobic requirements highlights the ecological versatility of Agrobacterium tumefaciens strain CFBP6623, making it a significant organism in both microbial ecology and agricultural biotechnology. Its capacity to thrive in diverse habitats indicates potential roles in soil health and plant productivity, warranting further exploration of its ecological contributions and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain CFBP6623

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain CFBP6623
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain CFBP6623


Gene Summary

Adenine Count

629263 bp

Thymine Count

618226 bp

Guanine Count

893014 bp

Cytosine Count

913143 bp

Genome Length

3053646 bp

Protein-coding Genes

2790 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitCFBP6623_RS03295Not Available+653702 - 65496146059.3
ChitinaseCFBP6623_RS03300Not Available+655515 - 65581110660.8
dabb family proteinCFBP6623_RS03305Not Available+655869 - 65617711349.4
Portal proteinCFBP6623_RS03310Not Available+656460 - 65762642065.4
duf6107 family proteinCFBP6623_RS03315Not Available+657822 - 65814211029.6
Putative prohead proteaseCFBP6623_RS03320Not Available+658189 - 65876121303.5
Major capsid proteinCFBP6623_RS03325Not Available+658798 - 66006645517.0
Dna packaging/head-tail-connectorCFBP6623_RS03330Not Available+660264 - 66083320726.3
Head closure proteinCFBP6623_RS03335Not Available+660837 - 66117212648.2
Putative tail proteinCFBP6623_RS03340Not Available+661169 - 66156414306.4

Displaying genes 1 – 10 of 5172 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites