Agrobacterium tumefaciens strain CFBP5499

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium tumefaciens strain CFBP5499 is a Gram-negative, rod-shaped bacterium that exhibits optimal growth at a temperature of 25.0°C. This strain is classified as an aerobic organism, indicating that it requires oxygen for its metabolic processes. A. tumefaciens is known for its diverse habitat, thriving in various environments, which suggests a degree of ecological versatility. Its ability to adapt to multiple habitats may be attributed to its metabolic flexibility and interactions with a wide range of plant hosts. This strain, like other members of the Agrobacterium genus, is recognized for its role in genetic transformation of plants, a process that can lead to crown gall disease. However, specific pathogenicity or ecological roles of strain CFBP5499 have not been detailed here. The ecological significance of A. tumefaciens strain CFBP5499 may include its potential use in biotechnological applications, particularly in plant genetic engineering, as well as its contributions to soil health through interactions with plant roots. The adaptability of this strain to different environments underscores its potential as a model organism for studying microbial ecology and plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium tumefaciens
Strainstrain CFBP5499

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Agrobacterium tumefaciens strain CFBP5499
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium tumefaciens strain CFBP5499


Gene Summary

Adenine Count

465823 bp

Thymine Count

469825 bp

Guanine Count

681096 bp

Cytosine Count

684581 bp

Genome Length

2301325 bp

Protein-coding Genes

1963 genes

Non-Coding Genes

108 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Gp54CFBP5499_RS19045Not Available-922347 - 9225598049.28
C-repressorCFBP5499_RS19050Not Available-922703 - 92338924916.6
helix-turn-helix domain-containing proteinCFBP5499_RS19060Not Available+923520 - 92384912103.6
hypothetical proteinCFBP5499_RS19065Not Available+924139 - 92488227482.8
hypothetical proteinCFBP5499_RS19070Not Available+925014 - 92538814360.4
Chromosome partitioning protein parbCFBP5499_RS19075Not Available+925381 - 92622631105.3
Hypothetical proteinCFBP5499_RS19080Not Available+926223 - 92668717962.6
TransposaseCFBP5499_RS19085Not Available+926684 - 92870274783.5
Transposase bCFBP5499_RS19090Not Available+928781 - 92981237254.4
hypothetical proteinCFBP5499_RS19095Not Available+929809 - 93013511642.0

Displaying genes 1 – 10 of 5416 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites