Agrobacterium larrymoorei strain CFBP5473

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium larrymoorei strain CFBP5473 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella. This motility feature may facilitate its interaction with host plants. The strain possesses a total of four replicons, which can be indicative of its genetic complexity and adaptability. This strain has been identified as having specific host associations, particularly with Ficus benjamina and other Ficus species. The ability to infect these plants suggests that A. larrymoorei may play a role in plant-microbe interactions, potentially influencing plant health or development. The genomic accessions associated with this strain are NZ_CP039691.1, NZ_CP039692.1, NZ_CP039694.1, and NZ_CP039693.1, which provide a basis for further genetic and functional studies. Understanding the genetic makeup and functional capabilities of Agrobacterium larrymoorei may shed light on its ecological role, including its potential applications in agriculture or biocontrol strategies. Overall, the specific traits of Agrobacterium larrymoorei strain CFBP5473 highlight its significance in plant-associated microbiomes, particularly in relation to Ficus species. This relationship underscores the importance of studying microbial interactions in ecological contexts to uncover the complexities of plant health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium larrymoorei
Strainstrain CFBP5473

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium larrymoorei strain CFBP5473
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ficus benjamina, Ficus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium larrymoorei strain CFBP5473 chromosome linear,

Gene Summary

Adenine Count

323092 bp

Thymine Count

316854 bp

Guanine Count

419953 bp

Cytosine Count

429585 bp

Genome Length

1489484 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bug family tripartite tricarboxylate transporter substrate binding proteinCFBP5473_RS19095Not AvailableNegative1036625 - 103761434445.5
phenylalanine--trna ligase subunit betaCFBP5473_RS19100Not AvailableNegative1037824 - 104024786066.2
duf2442 domain-containing proteinCFBP5473_RS19105Not AvailableNegative1040315 - 104059010146.0
duf4160 domain-containing proteinCFBP5473_RS19110Not AvailableNegative1040571 - 10408079323.07
phenylalanine--trna ligase subunit alphaCFBP5473_RS19115Not AvailableNegative1040810 - 104189240437.4
serine/threonine protein phosphataseCFBP5473_RS19120Not AvailableNegative1041885 - 104276332365.4
50s ribosomal protein l20CFBP5473_RS19125Not AvailableNegative1042893 - 104329715032.2
50s ribosomal protein l35CFBP5473_RS19130Not AvailableNegative1043338 - 10435417287.24
translation initiation factor if-3CFBP5473_RS19135Not AvailableNegative1043741 - 104428020352.2
alpha/beta hydrolaseCFBP5473_RS19140Not AvailablePositive1044460 - 104525429113.8

Displaying genes 941 – 950 of 4975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.