Agrobacterium larrymoorei strain CFBP5473

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium larrymoorei strain CFBP5473 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella. This motility feature may facilitate its interaction with host plants. The strain possesses a total of four replicons, which can be indicative of its genetic complexity and adaptability. This strain has been identified as having specific host associations, particularly with Ficus benjamina and other Ficus species. The ability to infect these plants suggests that A. larrymoorei may play a role in plant-microbe interactions, potentially influencing plant health or development. The genomic accessions associated with this strain are NZ_CP039691.1, NZ_CP039692.1, NZ_CP039694.1, and NZ_CP039693.1, which provide a basis for further genetic and functional studies. Understanding the genetic makeup and functional capabilities of Agrobacterium larrymoorei may shed light on its ecological role, including its potential applications in agriculture or biocontrol strategies. Overall, the specific traits of Agrobacterium larrymoorei strain CFBP5473 highlight its significance in plant-associated microbiomes, particularly in relation to Ficus species. This relationship underscores the importance of studying microbial interactions in ecological contexts to uncover the complexities of plant health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium larrymoorei
Strainstrain CFBP5473

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium larrymoorei strain CFBP5473
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ficus benjamina, Ficus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium larrymoorei strain CFBP5473 chromosome linear,

Gene Summary

Adenine Count

323092 bp

Thymine Count

316854 bp

Guanine Count

419953 bp

Cytosine Count

429585 bp

Genome Length

1489484 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
smp-30/gluconolactonase/lre family proteinCFBP5473_RS14765Not AvailableNegative92867 - 9372731429.9
hypothetical proteinCFBP5473_RS14770Not AvailableNegative93740 - 939919480.65
alpha-amylaseCFBP5473_RS14775Not AvailablePositive93990 - 9547455290.5
duf4394 domain-containing proteinCFBP5473_RS14780Not AvailableNegative95639 - 9642727735.5
sigma-70 family rna polymerase sigma factorCFBP5473_RS14785Not AvailablePositive96632 - 9717720547.8
anti-sigma factor domain-containing proteinCFBP5473_RS14790Not AvailablePositive97174 - 9787825045.9
alpha/beta fold hydrolaseCFBP5473_RS14795Not AvailableNegative97946 - 9876429326.9
m20 family metallopeptidaseCFBP5473_RS14800Not AvailableNegative99275 - 10049544436.3
llm class flavin-dependent oxidoreductaseCFBP5473_RS14805Not AvailableNegative100542 - 10086211771.3
utra domain-containing proteinCFBP5473_RS14810Not AvailablePositive100908 - 1011479118.89

Displaying genes 81 – 90 of 4975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.