Agrobacterium larrymoorei strain CFBP5473

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium larrymoorei strain CFBP5473 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella. This motility feature may facilitate its interaction with host plants. The strain possesses a total of four replicons, which can be indicative of its genetic complexity and adaptability. This strain has been identified as having specific host associations, particularly with Ficus benjamina and other Ficus species. The ability to infect these plants suggests that A. larrymoorei may play a role in plant-microbe interactions, potentially influencing plant health or development. The genomic accessions associated with this strain are NZ_CP039691.1, NZ_CP039692.1, NZ_CP039694.1, and NZ_CP039693.1, which provide a basis for further genetic and functional studies. Understanding the genetic makeup and functional capabilities of Agrobacterium larrymoorei may shed light on its ecological role, including its potential applications in agriculture or biocontrol strategies. Overall, the specific traits of Agrobacterium larrymoorei strain CFBP5473 highlight its significance in plant-associated microbiomes, particularly in relation to Ficus species. This relationship underscores the importance of studying microbial interactions in ecological contexts to uncover the complexities of plant health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium larrymoorei
Strainstrain CFBP5473

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium larrymoorei strain CFBP5473
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ficus benjamina, Ficus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium larrymoorei strain CFBP5473 chromosome linear,

Gene Summary

Adenine Count

323092 bp

Thymine Count

316854 bp

Guanine Count

419953 bp

Cytosine Count

429585 bp

Genome Length

1489484 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinCFBP5473_RS16730Not AvailableNegative530801 - 53182936626.3
response regulator transcription factorCFBP5473_RS16735Not AvailablePositive532047 - 53279327455.2
sensor histidine kinaseCFBP5473_RS16740Not AvailablePositive532790 - 53489275682.1
llm class flavin-dependent oxidoreductaseCFBP5473_RS16745Not AvailablePositive535069 - 53582226751.6
hypothetical proteinCFBP5473_RS16750Not AvailableNegative535815 - 53672934828.5
is3 family transposaseCFBP5473_RS16755Not AvailablePositive537147 - 53836645814.2
hypothetical proteinCFBP5473_RS16760Not AvailableNegative538367 - 53896623149.6
type ii toxin-antitoxin system rele/pare family toxinCFBP5473_RS16765Not AvailableNegative539092 - 53941211931.4
type ii toxin-antitoxin system pard family antitoxinCFBP5473_RS16770Not AvailableNegative539416 - 53968210005.8
tyrosine-type recombinase/integraseCFBP5473_RS25390Not AvailableNegative539873 - 54112347226.8

Displaying genes 471 – 480 of 4975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.