Agrobacterium larrymoorei strain CFBP5473

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Agrobacterium

Description

Agrobacterium larrymoorei strain CFBP5473 is a Gram-negative, rod-shaped bacterium characterized by the presence of flagella. This motility feature may facilitate its interaction with host plants. The strain possesses a total of four replicons, which can be indicative of its genetic complexity and adaptability. This strain has been identified as having specific host associations, particularly with Ficus benjamina and other Ficus species. The ability to infect these plants suggests that A. larrymoorei may play a role in plant-microbe interactions, potentially influencing plant health or development. The genomic accessions associated with this strain are NZ_CP039691.1, NZ_CP039692.1, NZ_CP039694.1, and NZ_CP039693.1, which provide a basis for further genetic and functional studies. Understanding the genetic makeup and functional capabilities of Agrobacterium larrymoorei may shed light on its ecological role, including its potential applications in agriculture or biocontrol strategies. Overall, the specific traits of Agrobacterium larrymoorei strain CFBP5473 highlight its significance in plant-associated microbiomes, particularly in relation to Ficus species. This relationship underscores the importance of studying microbial interactions in ecological contexts to uncover the complexities of plant health and disease management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusAgrobacterium
SpeciesAgrobacterium larrymoorei
Strainstrain CFBP5473

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Agrobacterium larrymoorei strain CFBP5473
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Ficus benjamina, Ficus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Agrobacterium larrymoorei strain CFBP5473 chromosome linear,

Gene Summary

Adenine Count

323092 bp

Thymine Count

316854 bp

Guanine Count

419953 bp

Cytosine Count

429585 bp

Genome Length

1489484 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acyl-coa dehydrogenase family proteinCFBP5473_RS16025Not AvailableNegative372435 - 37403958534.7
sdr family nad(p)-dependent oxidoreductaseCFBP5473_RS16030Not AvailableNegative374044 - 37480526082.6
feruloyl-coa synthaseCFBP5473_RS16035Not AvailableNegative374802 - 37665868198.5
crotonase/enoyl-coa hydratase family proteinCFBP5473_RS16040Not AvailablePositive376798 - 37758928098.5
marr family winged helix-turn-helix transcriptional regulatorCFBP5473_RS16045Not AvailablePositive377616 - 37806817079.6
amidohydrolase family proteinCFBP5473_RS16050Not AvailablePositive378093 - 37896833045.6
bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family proteinCFBP5473_RS16055Not AvailableNegative379005 - 38089770498.4
lysr family transcriptional regulatorCFBP5473_RS16060Not AvailableNegative380997 - 38193234100.5
rok family proteinCFBP5473_RS16065Not AvailableNegative382019 - 38293331389.0
n-acetylglucosamine-6-phosphate deacetylaseCFBP5473_RS16070Not AvailableNegative382930 - 38411140958.5

Displaying genes 331 – 340 of 4975 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.