Pseudomonas putida strain 1290

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain 1290 is a Gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. As a heterotroph, it derives its energy from organic compounds, demonstrating a versatile metabolism. This strain is classified as facultative, meaning it can grow in both aerobic and anaerobic conditions. Pseudomonas putida strain 1290 typically exists as single cells and possesses flagella, which contributes to its mobility. This bacterium has two replicons and two membranes, characteristic of its structure as a member of the Pseudomonas genus. It is categorized as mesophilic, indicating that it grows optimally at moderate temperatures. Pseudomonas putida strain 1290 has been identified as free-living, establishing relationships with various hosts, including plants like Triticum aestivum (wheat), Solanum lycopersicum (tomato), and Oryza sativa (rice), as well as other organisms such as Chlamydomonas reinhardtii and Struthio camelus (ostrich). While generally considered beneficial, Pseudomonas putida strain 1290 is associated with nosocomial infections in animals, highlighting its potential pathogenicity under certain conditions. This duality of being both a free-living organism and a potential pathogen illustrates its ecological significance. It plays a role in nutrient cycling in its natural habitats while also posing health risks in clinical settings, emphasizing the complexities of microbial interactions in both ecosystems and human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain 1290

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain 1290
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain 1290 chromosome, complete genome.

Gene Summary

Adenine Count

1197846 bp

Thymine Count

1196632 bp

Guanine Count

2050461 bp

Cytosine Count

2050947 bp

Genome Length

6495886 bp

Protein-coding Genes

5797 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hydroxyphenylacetyl-coa thioesterase paaiE6B08_RS10295Not AvailableNegative2233886 - 223434116239.3
3-hydroxyacyl-coa dehydrogenase paahE6B08_RS10300Not AvailableNegative2234338 - 223587053820.6
type ii toxin-antitoxin system hipa family toxinE6B08_RS10305Not AvailableNegative2235873 - 223666327972.8
2,3-dehydroadipyl-coa hydratase paafE6B08_RS10310Not AvailableNegative2236697 - 223747027273.2
phenylacetic acid degradation protein paayE6B08_RS10315Not AvailablePositive2237750 - 223834921105.5
phenylacetic acid degradation operon negative regulatory protein paaxE6B08_RS10320Not AvailablePositive2238427 - 223935635198.2
type ii toxin-antitoxin system hipa family toxinE6B08_RS10325Not AvailableNegative2239442 - 224042535971.5
abc transporter substrate-binding proteinE6B08_RS10330Not AvailableNegative2240422 - 224134532706.1
taud/tfda dioxygenase family proteinE6B08_RS10335Not AvailableNegative2241479 - 224230331159.0
tonb-dependent receptorE6B08_RS10340Not AvailableNegative2242351 - 224454679696.2

Displaying genes 2101 – 2110 of 6077 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total