Ralstonia pseudosolanacearum strain UW386

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Ralstonia

Description

Ralstonia pseudosolanacearum strain UW386 is a notable bacterial pathogen primarily associated with the host plant Solanum lycopersicum, commonly known as the tomato. This strain is characterized by having a single replicon, which is a significant trait as it can influence the genetic stability and replication dynamics of the organism. The complete genomic data for this strain is cataloged under the accession number NZ_CP039339.1, providing a reference point for researchers interested in studying its genetic and pathogenic characteristics. The ability of R. pseudosolanacearum to infect tomato plants highlights its role in agricultural contexts, particularly in the management of plant diseases. Ecologically, the interaction between R. pseudosolanacearum and its host can lead to significant agricultural challenges, including reduced crop yields and increased management costs for farmers. Understanding the genetics and biology of strain UW386 can provide insights into disease mechanisms and potential control strategies, which is crucial for sustainable agricultural practices. This strain exemplifies the importance of studying specific microbial interactions within agroecosystems, particularly in relation to crop health and food security.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusRalstonia
SpeciesRalstonia pseudosolanacearum
Strainstrain UW386

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ralstonia pseudosolanacearum strain UW386 chromosome, complete

Gene Summary

Adenine Count

598516 bp

Thymine Count

613591 bp

Guanine Count

1245217 bp

Cytosine Count

1200958 bp

Genome Length

3658282 bp

Protein-coding Genes

3299 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide heptosyltransferase iE7Z57_RS00400Not AvailablePositive78807 - 7980535879.6
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseE7Z57_RS00405Not AvailablePositive79805 - 8112147737.6
meta domain-containing proteinE7Z57_RS00410Not AvailablePositive81247 - 8199625154.9
tolc family outer membrane proteinE7Z57_RS00415Not AvailableNegative82005 - 8342950727.5
rhodanese-like domain-containing proteinE7Z57_RS00420Not AvailableNegative83529 - 8386112091.6
protein-l-isoaspartate o-methyltransferase family proteinE7Z57_RS00425Not AvailableNegative83887 - 8453723776.7
tetr/acrr family transcriptional regulatorE7Z57_RS00430Not AvailableNegative84624 - 8536727137.9
ykgj family cysteine cluster proteinE7Z57_RS00440Not AvailablePositive85560 - 858178899.87
duf1439 domain-containing proteinE7Z57_RS00445Not AvailablePositive85832 - 8642821294.8
undecaprenyl-diphosphate phosphataseE7Z57_RS00450Not AvailablePositive86487 - 8736832241.9

Displaying genes 211 – 220 of 3464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.