Ralstonia pseudosolanacearum strain UW386

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Ralstonia

Description

Ralstonia pseudosolanacearum strain UW386 is a notable bacterial pathogen primarily associated with the host plant Solanum lycopersicum, commonly known as the tomato. This strain is characterized by having a single replicon, which is a significant trait as it can influence the genetic stability and replication dynamics of the organism. The complete genomic data for this strain is cataloged under the accession number NZ_CP039339.1, providing a reference point for researchers interested in studying its genetic and pathogenic characteristics. The ability of R. pseudosolanacearum to infect tomato plants highlights its role in agricultural contexts, particularly in the management of plant diseases. Ecologically, the interaction between R. pseudosolanacearum and its host can lead to significant agricultural challenges, including reduced crop yields and increased management costs for farmers. Understanding the genetics and biology of strain UW386 can provide insights into disease mechanisms and potential control strategies, which is crucial for sustainable agricultural practices. This strain exemplifies the importance of studying specific microbial interactions within agroecosystems, particularly in relation to crop health and food security.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusRalstonia
SpeciesRalstonia pseudosolanacearum
Strainstrain UW386

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ralstonia pseudosolanacearum strain UW386 chromosome, complete

Gene Summary

Adenine Count

598516 bp

Thymine Count

613591 bp

Guanine Count

1245217 bp

Cytosine Count

1200958 bp

Genome Length

3658282 bp

Protein-coding Genes

3299 genes

Non-Coding Genes

165 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinE7Z57_RS12745Not AvailableNegative2672257 - 267306329101.3
Holin family proteinE7Z57_RS12750Not AvailableNegative2673060 - 267337411337.4
Holin family proteinE7Z57_RS12755Not AvailableNegative2673371 - 267377512928.8
Tail proteinE7Z57_RS12760Not AvailableNegative2673791 - 26739977250.71
Head completion/stabilization protein lE7Z57_RS12765Not AvailableNegative2673997 - 267447617094.1
Hypothetical proteinE7Z57_RS12770Not AvailableNegative2674574 - 267529626450.7
Capsid proteinE7Z57_RS12775Not AvailableNegative2675293 - 267630937997.0
Capsid scaffolding proteinE7Z57_RS12780Not AvailableNegative2676363 - 267720830313.3
Hypothetical proteinE7Z57_RS12785Not AvailablePositive2677352 - 267913367223.8
Portal vertex proteinE7Z57_RS12790Not AvailablePositive2679130 - 268023641588.4

Displaying genes 101 – 110 of 3464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.