Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga sp. PAMC20947 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
922995 bp
Thymine Count
925749 bp
Guanine Count
1500010 bp
Cytosine Count
1502113 bp
Genome Length
4850867 bp
Protein-coding Genes
4413 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-hydrate dehydratase | E5678_RS03675 | Not Available | Negative | 798329 - 799873 | 53353.1 |
| peptidoglycan-binding protein lysm | E5678_RS03680 | Not Available | Negative | 799880 - 800380 | 17577.0 |
| 30s ribosomal protein s2 | E5678_RS03685 | Not Available | Positive | 800803 - 801561 | 27680.7 |
| translation elongation factor ts | E5678_RS03690 | Not Available | Positive | 801667 - 802584 | 32383.7 |
| ump kinase | E5678_RS03695 | Not Available | Positive | 802763 - 803473 | 24933.5 |
| mbl fold metallo-hydrolase | E5678_RS03700 | Not Available | Positive | 803514 - 804073 | 20783.2 |
| polyprenyl diphosphate synthase | E5678_RS03705 | Not Available | Positive | 804122 - 804901 | 28538.1 |
| phosphatidate cytidylyltransferase | E5678_RS03710 | Not Available | Positive | 804894 - 805727 | 29549.3 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | E5678_RS03715 | Not Available | Positive | 805741 - 806922 | 41809.4 |
| rip metalloprotease rsep | E5678_RS03720 | Not Available | Positive | 807058 - 808422 | 48217.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
