Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga sp. PAMC20947 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
922995 bp
Thymine Count
925749 bp
Guanine Count
1500010 bp
Cytosine Count
1502113 bp
Genome Length
4850867 bp
Protein-coding Genes
4413 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | E5678_RS00310 | Not Available | Negative | 64537 - 65445 | 33249.8 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | E5678_RS00315 | Not Available | Negative | 65570 - 67171 | 55944.6 |
| thiazole synthase | E5678_RS00320 | Not Available | Negative | 67344 - 68123 | 27179.8 |
| aspartate 1-decarboxylase | E5678_RS00325 | Not Available | Negative | 68154 - 68534 | 13986.6 |
| sulfur carrier protein this | E5678_RS00330 | Not Available | Negative | 68594 - 68806 | 7424.0 |
| fad-dependent oxidoreductase | E5678_RS00335 | Not Available | Negative | 68799 - 69911 | 39390.6 |
| phosphomethylpyrimidine synthase thic | E5678_RS00340 | Not Available | Negative | 69915 - 71825 | 70624.6 |
| pas domain-containing protein | E5678_RS00345 | Not Available | Positive | 72528 - 75758 | 120416.0 |
| cation:proton antiporter | E5678_RS00350 | Not Available | Negative | 75925 - 77538 | 56411.8 |
| hypothetical protein | E5678_RS22755 | Not Available | Negative | 77549 - 77674 | 4263.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
