Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga sp. PAMC20947 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
922995 bp
Thymine Count
925749 bp
Guanine Count
1500010 bp
Cytosine Count
1502113 bp
Genome Length
4850867 bp
Protein-coding Genes
4413 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lon protease family protein | E5678_RS02940 | Not Available | Negative | 637924 - 640359 | 88977.4 |
| hydroxysqualene dehydroxylase hpne | E5678_RS02945 | Not Available | Negative | 640480 - 641862 | 48535.3 |
| presqualene diphosphate synthase hpnd | E5678_RS02950 | Not Available | Negative | 641897 - 642763 | 32421.0 |
| hypothetical protein | E5678_RS02955 | Not Available | Positive | 642895 - 643302 | 14867.8 |
| zip family metal transporter | E5678_RS02960 | Not Available | Positive | 643305 - 644024 | 25350.8 |
| squalene synthase hpnc | E5678_RS02965 | Not Available | Negative | 644035 - 644943 | 33578.3 |
| efflux rnd transporter periplasmic adaptor subunit | E5678_RS02970 | Not Available | Positive | 645173 - 646279 | 38139.9 |
| efflux rnd transporter permease subunit | E5678_RS02975 | Not Available | Positive | 646287 - 649448 | 114648.0 |
| murr/rpir family transcriptional regulator | E5678_RS02980 | Not Available | Positive | 649527 - 650426 | 32253.6 |
| aspartate aminotransferase family protein | E5678_RS02985 | Not Available | Positive | 650488 - 651852 | 48868.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
