Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga sp. PAMC20947 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
922995 bp
Thymine Count
925749 bp
Guanine Count
1500010 bp
Cytosine Count
1502113 bp
Genome Length
4850867 bp
Protein-coding Genes
4413 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | E5678_RS21905 | Not Available | Positive | 4791922 - 4792221 | 11016.3 |
| cytochrome b/b6 domain-containing protein | E5678_RS21910 | Not Available | Positive | 4792333 - 4792929 | 21608.3 |
| carboxy terminal-processing peptidase | E5678_RS21915 | Not Available | Negative | 4793906 - 4796062 | 78662.6 |
| hypothetical protein | E5678_RS21920 | Not Available | Negative | 4796397 - 4796912 | 17888.6 |
| helix-turn-helix domain-containing protein | E5678_RS21925 | Not Available | Negative | 4797616 - 4798593 | 35024.7 |
| alpha/beta fold hydrolase | E5678_RS21930 | Not Available | Positive | 4798764 - 4799657 | 32309.3 |
| plp-dependent aminotransferase family protein | E5678_RS21935 | Not Available | Negative | 4800642 - 4802039 | 51216.9 |
| trap transporter substrate-binding protein dctp | E5678_RS21940 | Not Available | Positive | 4802250 - 4803299 | 36989.7 |
| trap transporter small permease subunit | E5678_RS21945 | Not Available | Positive | 4803384 - 4803920 | 20299.3 |
| trap transporter large permease subunit | E5678_RS21950 | Not Available | Positive | 4803917 - 4805233 | 47104.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
