Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga sp. PAMC20947 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
922995 bp
Thymine Count
925749 bp
Guanine Count
1500010 bp
Cytosine Count
1502113 bp
Genome Length
4850867 bp
Protein-coding Genes
4413 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonate dehydrogenase | E5678_RS17310 | Not Available | Positive | 3773865 - 3774794 | 31756.2 |
| 3-oxo-tetronate kinase | E5678_RS17315 | Not Available | Positive | 3774791 - 3776059 | 43304.2 |
| aldolase | E5678_RS17320 | Not Available | Positive | 3776059 - 3776733 | 24271.2 |
| 2-oxo-tetronate isomerase | E5678_RS17325 | Not Available | Positive | 3776758 - 3777558 | 28979.4 |
| d-erythronate dehydrogenase | E5678_RS17330 | Not Available | Positive | 3777555 - 3778583 | 35951.0 |
| trap transporter substrate-binding protein | E5678_RS17335 | Not Available | Positive | 3778637 - 3779599 | 34525.6 |
| trap transporter small permease | E5678_RS17340 | Not Available | Positive | 3779759 - 3780250 | 18411.1 |
| trap transporter large permease | E5678_RS17345 | Not Available | Positive | 3780322 - 3781647 | 45956.4 |
| aldehyde dehydrogenase family protein | E5678_RS17350 | Not Available | Positive | 3781665 - 3783098 | 50484.2 |
| sdr family oxidoreductase | E5678_RS17355 | Not Available | Positive | 3783265 - 3784026 | 26315.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
