Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga sp. PAMC20947 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
922995 bp
Thymine Count
925749 bp
Guanine Count
1500010 bp
Cytosine Count
1502113 bp
Genome Length
4850867 bp
Protein-coding Genes
4413 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsre family protein | E5678_RS01640 | Not Available | Negative | 358298 - 358726 | 15783.2 |
| lysr family transcriptional regulator | E5678_RS01645 | Not Available | Positive | 358846 - 359610 | 26075.3 |
| atp-binding cassette domain-containing protein | E5678_RS01650 | Not Available | Negative | 359712 - 360452 | 26625.6 |
| tripartite tricarboxylate transporter substrate binding protein | E5678_RS01655 | Not Available | Negative | 360449 - 361489 | 37831.5 |
| pqq-dependent catabolism-associated beta-propeller protein | E5678_RS01660 | Not Available | Positive | 361699 - 362697 | 35330.5 |
| abc transporter substrate-binding protein | E5678_RS01665 | Not Available | Positive | 362694 - 363974 | 45913.1 |
| abc transporter permease | E5678_RS01670 | Not Available | Positive | 363956 - 364801 | 31035.8 |
| pyrroloquinoline quinone biosynthesis protein pqqe | E5678_RS01675 | Not Available | Negative | 364899 - 366041 | 42558.9 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | E5678_RS01680 | Not Available | Negative | 366096 - 366368 | 10332.4 |
| pyrroloquinoline-quinone synthase pqqc | E5678_RS01685 | Not Available | Negative | 366495 - 367229 | 27959.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
