Hydrogenophaga sp. PAMC20947

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Hydrogenophaga

Description

Hydrogenophaga sp. PAMC20947 is a Gram-negative, rod-shaped bacterium characterized by its single replicon structure. This organism is a member of the Hydrogenophaga genus, which is known for its metabolic capabilities, particularly in environments where hydrogen is present. The accession number associated with this strain is NZ_CP039252.1, which provides a reference for its genomic information. The Gram-negative classification indicates that Hydrogenophaga sp. PAMC20947 possesses a thin peptidoglycan layer surrounded by an outer membrane, a feature common among many bacteria that can influence their interactions with the environment and their susceptibility to antibiotics. The rod shape is typical for many bacteria, allowing for efficient movement and nutrient uptake in various habitats. Understanding the specific traits of Hydrogenophaga sp. PAMC20947 can offer insights into its potential ecological roles, particularly in hydrogen-utilizing environments. Such environments might include wastewater treatment systems or natural settings where organic matter decomposition occurs. The metabolic capabilities associated with the Hydrogenophaga genus suggest that this strain may play a significant role in biogeochemical cycles, especially in the transformation of hydrogen and other compounds. This insight underscores the importance of studying diverse microbial species, as they contribute to ecological balance and nutrient cycling in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusHydrogenophaga
SpeciesHydrogenophaga sp. PAMC20947
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hydrogenophaga sp. PAMC20947 chromosome, complete genome.

Gene Summary

Adenine Count

922995 bp

Thymine Count

925749 bp

Guanine Count

1500010 bp

Cytosine Count

1502113 bp

Genome Length

4850867 bp

Protein-coding Genes

4413 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter permeaseE5678_RS01495Not AvailableNegative327206 - 32923371271.0
taxi family trap transporter solute-binding subunitE5678_RS01500Not AvailableNegative329354 - 33031333662.7
sigma-54-dependent transcriptional regulatorE5678_RS01505Not AvailableNegative330516 - 33183548614.7
atp-binding proteinE5678_RS01510Not AvailableNegative331841 - 33361964899.4
taxi family trap transporter solute-binding subunitE5678_RS01515Not AvailableNegative333722 - 33468133666.6
site-specific tyrosine recombinase xerdE5678_RS01520Not AvailablePositive334830 - 33578335279.4
pa4780 family rio1-like protein kinaseE5678_RS01525Not AvailableNegative335819 - 33668231669.7
hypothetical proteinE5678_RS01530Not AvailableNegative336711 - 3369689532.19
phospholipase d-like domain-containing proteinE5678_RS01535Not AvailableNegative337031 - 33847953127.5
pp_00309E5678_RS01540Not AvailableNegative338476 - 339231Not Available

Displaying genes 301 – 310 of 4469 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.