Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Hydrogenophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Hydrogenophaga |
| Species | Hydrogenophaga sp. PAMC20947 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
922995 bp
Thymine Count
925749 bp
Guanine Count
1500010 bp
Cytosine Count
1502113 bp
Genome Length
4850867 bp
Protein-coding Genes
4413 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase accessory protein xdhc | E5678_RS00060 | Not Available | Positive | 12347 - 13153 | 28279.9 |
| urate hydroxylase puud | E5678_RS00065 | Not Available | Positive | 13321 - 14517 | 44078.8 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | E5678_RS00070 | Not Available | Positive | 14718 - 15824 | 39575.0 |
| s-formylglutathione hydrolase | E5678_RS00075 | Not Available | Positive | 15967 - 16833 | 31250.0 |
| amp-binding protein | E5678_RS00080 | Not Available | Negative | 16943 - 18634 | 62633.8 |
| alpha/beta hydrolase | E5678_RS00085 | Not Available | Positive | 18870 - 19595 | 25808.8 |
| rieske (2fe-2s) protein | E5678_RS00090 | Not Available | Positive | 19671 - 20021 | 12801.6 |
| sdr family nad(p)-dependent oxidoreductase | E5678_RS00095 | Not Available | Positive | 20215 - 20967 | 25797.9 |
| 8-oxoguanine deaminase | E5678_RS00100 | Not Available | Negative | 20983 - 22440 | 51971.3 |
| glycerate kinase | E5678_RS00105 | Not Available | Positive | 22573 - 23886 | 45477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
