Sphingomonas sp. PAMC26645

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. PAMC26645 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates motility. This organism possesses a single replicon, indicating a streamlined genomic structure that can influence its replication and maintenance processes. The sequence data for Sphingomonas sp. PAMC26645 can be accessed through the GenBank accession NZ_CP039249.1. Members of the Sphingomonas genus are known to thrive in diverse environments, often exhibiting versatile metabolic capabilities. This adaptability can allow them to play significant roles in biogeochemical cycles and the degradation of complex organic compounds in their habitats. The presence of flagella suggests that Sphingomonas sp. PAMC26645 may be capable of moving toward favorable environmental conditions, which can enhance its survival and ecological interactions. Overall, the traits of Sphingomonas sp. PAMC26645 indicate its potential ecological significance, particularly in nutrient cycling and organic matter degradation in various environments. The motility conferred by flagella may further enhance its ability to colonize and thrive in these niches, contributing to the diversity and functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. PAMC26645
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. PAMC26645
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. PAMC26645 chromosome, complete genome.

Gene Summary

Adenine Count

743959 bp

Thymine Count

745201 bp

Guanine Count

1402896 bp

Cytosine Count

1391900 bp

Genome Length

4283956 bp

Protein-coding Genes

3846 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitroreductaseE5673_RS00425Not AvailableNegative81210 - 8187524574.5
atp-dependent protease atpase subunit hsluE5673_RS00430Not AvailableNegative82058 - 8335347224.6
atp-dependent protease subunit hslvE5673_RS00435Not AvailableNegative83473 - 8401519344.3
is481 family transposaseE5673_RS00440Not AvailableNegative84247 - 844808286.17
glycoside hydrolase family 108 proteinE5673_RS00445Not AvailableNegative84568 - 8510419635.3
nadp-dependent malic enzymeE5673_RS00450Not AvailablePositive85627 - 8790981127.3
Trna-proNot AvailableNot AvailablePositive88051 - 88127Not Available
putative quinol monooxygenaseE5673_RS00460Not AvailableNegative88235 - 8854311075.3
preprotein translocase subunit yajcE5673_RS00465Not AvailablePositive88714 - 8905812025.7
protein translocase subunit secdE5673_RS00470Not AvailablePositive89058 - 9066257016.9

Displaying genes 171 – 180 of 3957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.