Sphingomonas sp. PAMC26645

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas sp. PAMC26645 is a rod-shaped bacterium characterized by the presence of flagella, which likely facilitates motility. This organism possesses a single replicon, indicating a streamlined genomic structure that can influence its replication and maintenance processes. The sequence data for Sphingomonas sp. PAMC26645 can be accessed through the GenBank accession NZ_CP039249.1. Members of the Sphingomonas genus are known to thrive in diverse environments, often exhibiting versatile metabolic capabilities. This adaptability can allow them to play significant roles in biogeochemical cycles and the degradation of complex organic compounds in their habitats. The presence of flagella suggests that Sphingomonas sp. PAMC26645 may be capable of moving toward favorable environmental conditions, which can enhance its survival and ecological interactions. Overall, the traits of Sphingomonas sp. PAMC26645 indicate its potential ecological significance, particularly in nutrient cycling and organic matter degradation in various environments. The motility conferred by flagella may further enhance its ability to colonize and thrive in these niches, contributing to the diversity and functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas sp. PAMC26645
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sphingomonas sp. PAMC26645
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas sp. PAMC26645 chromosome, complete genome.

Gene Summary

Adenine Count

743959 bp

Thymine Count

745201 bp

Guanine Count

1402896 bp

Cytosine Count

1391900 bp

Genome Length

4283956 bp

Protein-coding Genes

3846 genes

Non-Coding Genes

111 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide-methionine (s)-s-oxide reductase msraE5673_RS04765Not AvailableNegative985675 - 98621419934.2
peptide-methionine (r)-s-oxide reductase msrbE5673_RS04770Not AvailableNegative986216 - 98665916391.8
lysr family transcriptional regulatorE5673_RS04775Not AvailableNegative986809 - 98768432733.1
marr family winged helix-turn-helix transcriptional regulatorE5673_RS04780Not AvailableNegative987903 - 98843018996.8
alpha-ketoglutarate-dependent dioxygenase alkbE5673_RS04785Not AvailableNegative988558 - 98914522387.6
dsba family oxidoreductaseE5673_RS04790Not AvailablePositive989249 - 98989623239.6
hypothetical proteinE5673_RS20150Not AvailableNegative990050 - 9901754441.41
duf1810 domain-containing proteinE5673_RS04795Not AvailableNegative990242 - 99067015398.3
hypothetical proteinE5673_RS04800Not AvailablePositive990771 - 99128317952.1
ybhb/ybcl family raf kinase inhibitor-like proteinE5673_RS04805Not AvailablePositive991287 - 99190421203.0

Displaying genes 1001 – 1010 of 3957 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.