Rhodophyticola sp. CCM32

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Rhodophyticola

Description

Rhodophyticola sp. CCM32 is characterized by having a single replicon, which is a notable trait in its genomic structure. The organism is cataloged under the accession number NZ_CP038492.1, indicating its classification within a specific genomic database. The single replicon indicates a streamlined genomic organization, which can be advantageous for the organism's adaptability and efficiency in various environments. This trait could suggest a simpler regulatory mechanism in comparison to organisms with multiple replicons, potentially allowing for more rapid responses to environmental changes. As a member of the Rhodophyticola genus, this organism is likely associated with red algae, which could influence its ecological role and interactions within its habitat. The relationship with red algae may provide insights into its nutritional strategies and symbiotic relationships, although specific details regarding its ecological interactions or metabolic pathways are not provided. In summary, Rhodophyticola sp. CCM32, with its single replicon and specific genomic accession, exemplifies a streamlined genomic structure that may facilitate adaptability. Its association with red algae likely plays a significant role in its ecological niche, although the precise biological implications of this relationship remain to be fully understood.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusRhodophyticola
SpeciesRhodophyticola sp. CCM32
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodophyticola sp. CCM32 chromosome, complete genome.

Gene Summary

Adenine Count

762191 bp

Thymine Count

763579 bp

Guanine Count

1180330 bp

Cytosine Count

1156805 bp

Genome Length

3862905 bp

Protein-coding Genes

3779 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinE2K80_RS19980Not AvailableNegative3472835 - 347330517041.6
flagellar biosynthetic protein flirE2K80_RS16970Not AvailableNegative3473305 - 347408126907.1
nudix hydrolaseE2K80_RS16975Not AvailableNegative3474078 - 347616174657.9
transglycosylase slt domain-containing proteinE2K80_RS16980Not AvailableNegative3476161 - 347689826966.8
hypothetical proteinE2K80_RS16985Not AvailableNegative3477117 - 347918374274.3
flagellar motor stator protein motaE2K80_RS16990Not AvailableNegative3479180 - 348004931434.4
mote family proteinE2K80_RS16995Not AvailableNegative3480098 - 348071221904.3
duf6468 domain-containing proteinE2K80_RS17000Not AvailableNegative3480709 - 348120617215.5
flagellar basal body-associated protein flilE2K80_RS17005Not AvailableNegative3481206 - 348157713530.3
flagellar basal-body ms-ring/collar protein flifE2K80_RS17010Not AvailablePositive3481836 - 348351558723.2

Displaying genes 3441 – 3450 of 3842 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.