Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN027346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
24934 bp
Thymine Count
25270 bp
Guanine Count
23058 bp
Cytosine Count
22754 bp
Genome Length
96016 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1a ribonucleoside-diphosphate reductase subunit alpha | EKI52_RS23935 | Not Available | Negative | 4652136 - 4654421 | 85723.9 |
| protein ypab | EKI52_RS30975 | Not Available | Positive | 4654549 - 4654692 | 5295.47 |
| aida-i family autotransporter adhesin yfal/ehac | EKI52_RS23940 | Not Available | Positive | 4655117 - 4658851 | 130779.0 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | EKI52_RS23945 | Not Available | Negative | 4658979 - 4659701 | 26587.0 |
| mannitol dehydrogenase family protein | EKI52_RS24350 | Not Available | Positive | 4714606 - 4714701 | 3749.52 |
| alpha-2-macroglobulin family protein | EKI52_RS24355 | Not Available | Positive | 4714725 - 4719239 | 166425.0 |
| yfaq family protein | EKI52_RS24360 | Not Available | Positive | 4719240 - 4720889 | 61479.2 |
| yfap family protein | EKI52_RS24365 | Not Available | Positive | 4720894 - 4721670 | 28291.2 |
| two-component system sensor histidine kinase rcsc | EKI52_RS24370 | Not Available | Positive | 4721945 - 4724794 | 106559.0 |
| response regulator transcription factor rcsb | EKI52_RS24375 | Not Available | Negative | 4724925 - 4725575 | 23672.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





