Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN027346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
24934 bp
Thymine Count
25270 bp
Guanine Count
23058 bp
Cytosine Count
22754 bp
Genome Length
96016 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | EKI52_RS22395 | Not Available | Negative | 4361103 - 4362230 | 41270.4 |
| arsc family reductase | EKI52_RS22400 | Not Available | Negative | 4362234 - 4362590 | 13515.2 |
| protein ypfm | EKI52_RS22405 | Not Available | Positive | 4362971 - 4363030 | 2408.02 |
| multidrug efflux rnd transporter permease acrd | EKI52_RS22415 | Not Available | Negative | 4363129 - 4366242 | 113054.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | EKI52_RS22420 | Not Available | Negative | 4366406 - 4368106 | 63630.6 |
| formate-dependent uric acid utilization protein aega | EKI52_RS22425 | Not Available | Positive | 4368312 - 4370291 | 71900.0 |
| gdp-mannose pyrophosphatase nudk | EKI52_RS22430 | Not Available | Positive | 4370359 - 4370934 | 21719.9 |
| duf1176 domain-containing protein | EKI52_RS22435 | Not Available | Positive | 4371060 - 4372103 | 38701.4 |
| transketolase | EKI52_RS22440 | Not Available | Negative | 4372199 - 4374202 | 73105.9 |
| transaldolase | EKI52_RS22445 | Not Available | Negative | 4374222 - 4375172 | 35660.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





