Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN027346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
24934 bp
Thymine Count
25270 bp
Guanine Count
23058 bp
Cytosine Count
22754 bp
Genome Length
96016 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | EKI52_RS21855 | Not Available | Positive | 4240782 - 4241519 | 27209.4 |
| l-aspartate oxidase | EKI52_RS21860 | Not Available | Negative | 4241504 - 4243126 | 60206.7 |
| rpoe leader peptide rsed | EKI52_RS21865 | Not Available | Positive | 4243382 - 4243537 | 6229.83 |
| rna polymerase sigma factor rpoe | EKI52_RS21870 | Not Available | Positive | 4243534 - 4244109 | 21697.0 |
| anti-sigma-e factor rsea | EKI52_RS21875 | Not Available | Positive | 4244142 - 4244792 | 24322.8 |
| sigma-e factor regulatory protein rseb | EKI52_RS21880 | Not Available | Positive | 4244792 - 4245748 | 35763.8 |
| soxr-reducing system protein rsec | EKI52_RS21885 | Not Available | Positive | 4245745 - 4246224 | 16654.4 |
| translation elongation factor 4 | EKI52_RS21890 | Not Available | Positive | 4246422 - 4248221 | 66574.1 |
| signal peptidase i | EKI52_RS21895 | Not Available | Positive | 4248237 - 4249211 | 35948.3 |
| ribonuclease iii | EKI52_RS21900 | Not Available | Positive | 4249484 - 4250164 | 25551.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





