Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN027346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
24934 bp
Thymine Count
25270 bp
Guanine Count
23058 bp
Cytosine Count
22754 bp
Genome Length
96016 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bame | EKI52_RS21650 | Not Available | Negative | 4199599 - 4199940 | 12302.8 |
| dna repair protein recn | EKI52_RS21655 | Not Available | Negative | 4200089 - 4201750 | 61400.1 |
| nad(+) kinase | EKI52_RS21660 | Not Available | Negative | 4201836 - 4202714 | 32568.3 |
| nucleotide exchange factor grpe | EKI52_RS21670 | Not Available | Positive | 4202837 - 4203430 | 21813.1 |
| hlyc/corc family transporter | EKI52_RS21675 | Not Available | Negative | 4203485 - 4204771 | 48047.2 |
| inner membrane protein ypjd | EKI52_RS21680 | Not Available | Negative | 4204792 - 4205583 | 29263.9 |
| signal recognition particle protein | EKI52_RS21685 | Not Available | Positive | 4205750 - 4207111 | 49772.4 |
| 30s ribosomal protein s16 | EKI52_RS21690 | Not Available | Positive | 4207360 - 4207608 | 9191.08 |
| ribosome maturation factor rimm | EKI52_RS21695 | Not Available | Positive | 4207627 - 4208175 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EKI52_RS21700 | Not Available | Positive | 4208206 - 4208973 | 28424.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





