Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN027346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
24934 bp
Thymine Count
25270 bp
Guanine Count
23058 bp
Cytosine Count
22754 bp
Genome Length
96016 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EKI52_RS21250 | Not Available | Positive | 4135379 - 4137097 | 66114.8 |
| response regulator receiver domain | EKI52_RS21255 | Not Available | Positive | 4137099 - 4138847 | 66535.3 |
| hypothetical protein | EKI52_RS21260 | Not Available | Negative | 4138919 - 4139335 | 15958.7 |
| type iii secretion system effector espn | EKI52_RS21615 | Not Available | Positive | 4191273 - 4194674 | 129928.0 |
| type iii secretion system effector espk | EKI52_RS21620 | Not Available | Negative | 4195051 - 4196412 | 51008.1 |
| mannitol dehydrogenase family protein | EKI52_RS21625 | Not Available | Negative | 4197071 - 4197319 | 9209.01 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 4197590 - 4197952 | Not Available |
| ssra-binding protein smpb | EKI52_RS21635 | Not Available | Negative | 4198167 - 4198649 | 18270.1 |
| type ii toxin-antitoxin system toxin rata | EKI52_RS21640 | Not Available | Positive | 4198820 - 4199257 | 16236.6 |
| rnfh family protein | EKI52_RS21645 | Not Available | Positive | 4199247 - 4199537 | 10790.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





