Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CFSAN027346 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
24934 bp
Thymine Count
25270 bp
Guanine Count
23058 bp
Cytosine Count
22754 bp
Genome Length
96016 bp
Protein-coding Genes
101 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | EKI52_RS00675 | Not Available | Positive | 147756 - 148679 | 33375.5 |
| methyl-accepting chemotaxis protein trg | EKI52_RS00680 | Not Available | Negative | 148717 - 150357 | 58911.3 |
| type i toxin-antitoxin system toxin hokb | EKI52_RS00690 | Not Available | Positive | 150756 - 150905 | 5626.16 |
| hypothetical protein | EKI52_RS30425 | Not Available | Negative | 150883 - 150951 | 2428.15 |
| periplasmic protein | EKI52_RS00695 | Not Available | Negative | 150977 - 151150 | 5860.19 |
| cytochrome b561 | EKI52_RS00700 | Not Available | Negative | 151395 - 151925 | 20273.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EKI52_RS00705 | Not Available | Positive | 152114 - 153115 | 35766.7 |
| aldehyde dehydrogenase | EKI52_RS00710 | Not Available | Negative | 153157 - 154596 | 52197.7 |
| duf218 domain-containing protein ydcf | EKI52_RS00715 | Not Available | Negative | 154793 - 155593 | 29707.4 |
| atp-dependent rna helicase hrpa | EKI52_RS00720 | Not Available | Negative | 155865 - 159767 | 149008.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





