Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | IB64_RS04660 | Not Available | Positive | 1108687 - 1110522 | 68932.6 |
| viroplasmin family protein | IB64_RS04665 | Not Available | Negative | 1110742 - 1111377 | 23665.2 |
| nitroreductase family protein | IB64_RS04670 | Not Available | Positive | 1111498 - 1112100 | 22918.2 |
| shikimate kinase | IB64_RS04675 | Not Available | Positive | 1112700 - 1113239 | 20821.1 |
| tetratricopeptide repeat protein | IB64_RS04680 | Not Available | Positive | 1113387 - 1115885 | 94974.6 |
| hsp90 family protein | IB64_RS04685 | Not Available | Positive | 1115892 - 1117658 | 67010.2 |
| hypothetical protein | IB64_RS04690 | Not Available | Positive | 1117667 - 1118746 | 42527.4 |
| biosynthetic arginine decarboxylase | IB64_RS04695 | Not Available | Positive | 1118804 - 1120696 | 71235.8 |
| acetylglutamate kinase | IB64_RS04700 | Not Available | Positive | 1120830 - 1121603 | 27418.4 |
| rna polymerase sigma factor | IB64_RS04705 | Not Available | Positive | 1121665 - 1122174 | 20092.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



