Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain DCMOUH0085B |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1549643 bp
Thymine Count
1554580 bp
Guanine Count
1194780 bp
Cytosine Count
1205073 bp
Genome Length
5504076 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IB64_RS04450 | Not Available | Negative | 1059967 - 1061187 | 45173.9 |
| carbohydrate-binding family 9-like protein | IB64_RS04455 | Not Available | Positive | 1061418 - 1062059 | 24462.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | IB64_RS04460 | Not Available | Negative | 1062157 - 1062927 | 27834.4 |
| efflux transporter outer membrane subunit | IB64_RS04465 | Not Available | Negative | 1062947 - 1064338 | 50312.0 |
| efflux rnd transporter permease subunit | IB64_RS04470 | Not Available | Negative | 1064355 - 1067558 | 116559.0 |
| efflux rnd transporter periplasmic adaptor subunit | IB64_RS04475 | Not Available | Negative | 1067580 - 1068740 | 41534.9 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | IB64_RS04480 | Not Available | Negative | 1069080 - 1072187 | 118306.0 |
| ig-like domain-containing protein | IB64_RS04485 | Not Available | Positive | 1072293 - 1074215 | 73250.6 |
| duf3108 domain-containing protein | IB64_RS04490 | Not Available | Positive | 1074151 - 1075032 | 34077.2 |
| paai family thioesterase | IB64_RS04495 | Not Available | Negative | 1075022 - 1075426 | 14689.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



